A Shiny app for visualization of single-cell data

launch_scX() launches the scX Shiny app for visualizing single-cell data

Usage

launch_scX(
  cseo,
  dataset_name = "scX",
  point.size = 20,
  launch.browser = T,
  host = getOption("shiny.host", "127.0.0.1"),
  port = getOption("shiny.port")
)

Arguments

cseo

List with a SingleCellExperiment object returned by createSCEobject().

dataset_name

Optional name for app title.

point.size

Point size for plots in app. Defaults to 20.

launch.browser

Launch Shiny app in browser or not. Defaults to TRUE.